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Intron Name: Anas_platyrhynchos_platyrhynchos_2_74214164_74216971_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74214164 - 74216971

Intron Length:

2808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ATTTATATAATC

Flanking Amino Acid:

EKKKLQNQLQGAIVMERPNV

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.1

78.8

38.3

Major BPS

0.72

78.4

31.2

Major PPT

82.6

0.73

0.9

79.9

32.3

Minor 5ss

49.4

-0

2.5

66.9

44.4

Minor BPS

56.4

0.18

1.7

70.71

34.2

Associated Gene:

Gene:

VPS4B

Ensembl Gene ID:

ENSAPLG00000006557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006878

74209704 - 74227906

18203