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Intron Name: Anas_platyrhynchos_platyrhynchos_2_74219231_74220730_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74219231 - 74220730

Intron Length:

1500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGATGG

5'SS Class:

major

3'SS Sequence:

TTTTTGAAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TCTTTTTGAAAC

Flanking Amino Acid:

PWVLDSAIRRRFEKRIYIPL

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

63.6

43.6

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

70.8

0.47

1.1

64.6

44.9

Minor 5ss

36.3

-1.6

3.2

47.6

47.8

Minor BPS

58.3

0.24

1.5

67.73

37.9

Associated Gene:

Gene:

VPS4B

Ensembl Gene ID:

ENSAPLG00000006557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006878

74209704 - 74227906

18203