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Intron Name: Anas_platyrhynchos_platyrhynchos_2_74242060_74243166_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
74242060 - 74243166

Intron Length:
1107

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGTGTA

5'SS Class:
strong_major

3'SS Sequence:
ATATCCGTTTCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTCAT

U12 Branch Point Sequence:
CTGTTCTTATAT

Flanking Amino Acid:
AFITLIARDENKLLQTKKEI

Intron Amino Acid Position:
67

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
97.5
1.12
0.6
90.6
20.3

Major BPS
94.9
1.12
0.6
93.9
14.7

Major PPT
74.3
0.55
1
70.2
40.5

Minor 5ss
36.3
-1.6
3.3
49
47.2

Minor BPS
56.7
0.29
1.8
72.33
44.7

Associated Gene:

Gene:
KDSR

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

74236434 - 74250110
13677

74236434 - 74255790
19357