Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_74247059_74247205_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74247059 - 74247205

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TATCCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

AACATCTTGACA

Flanking Amino Acid:

YEQVENVLKQAQEKLGPVDL

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

74.7

Major BPS

100

1.24

0.5

100

Major PPT

82.4

0.73

0.8

73.6

36.6

Minor 5ss

26.2

-2.7

2.9

29.6

43.4

Minor BPS

59.2

0.28

1.3

61.75

Associated Gene:

Gene:

KDSR

Ensembl Gene ID:

ENSAPLG00000006943

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033483

74236434 - 74250110

13677

ENSAPLT00000007232

74236434 - 74255790

19357