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Intron Name: Anas_platyrhynchos_platyrhynchos_2_74636813_74637896_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74636813 - 74637896

Intron Length:

1084

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTACTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TCAGCTGTAATG

Flanking Amino Acid:

CAPGFGIGHPVQQDKDTKCM

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

73.9

30.8

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

80.1

0.68

0.9

35.6

Minor 5ss

38.4

-1.3

3.1

47.6

42.6

Minor BPS

46.4

-0.4

2.1

50.99

44.3

Associated Gene:

Gene:

TNFRSF11A

Ensembl Gene ID:

ENSAPLG00000026395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045678

74624689 - 74648180

23492