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Intron Name: Anas_platyrhynchos_platyrhynchos_2_74659774_74660433_R


Intron Information:

Intron Rank:
24

Intron Class:
minor

Intron Phase:
1

Intron Coordinates:
74659774 - 74660433

Intron Length:
660

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTT|GTATCCTTT

5'SS Class:
strong_minor

3'SS Sequence:
ACACAATTTTTAG|T

3'SS Class:
minor_BPS

U2 Branch Point Sequence:
TTCAAAA

U12 Branch Point Sequence:
ACTACCTTAACA

Flanking Amino Acid:
FEAYSALSCCFISEDLMVNH

Intron Amino Acid Position:
989

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
50.9
0.02
1.2
57.1
42.4

Major BPS
68.1
0.45
1
73.5
28.6

Major PPT
63.8
0.31
1
59.2
40.9

Minor 5ss
98.8
1.64
0.5
96
12.5

Minor BPS
77.9
0.87
1.2
78.76
37.4

Associated Gene:

Gene:
RELCH

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

74655376 - 74703638
48263

74655376 - 74703638
48263

74655376 - 74703638
48263