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Intron Name: Anas_platyrhynchos_platyrhynchos_2_75022298_75026361_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75022298 - 75026361

Intron Length:

4064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTAAAG

5'SS Class:

major

3'SS Sequence:

TTTTTCTCCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGATAT

U12 Branch Point Sequence:

TAATGCTAGATA

Flanking Amino Acid:

YQVGIITVRKPLSFESKKSY

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

64.4

41.5

Major BPS

56.3

0.16

1.2

42.8

Major PPT

85.6

0.8

0.6

85.7

21.5

Minor 5ss

31.5

-2.1

3.1

39.5

Minor BPS

47.2

-0.2

2.1

59.41

40.8

Associated Gene:

Gene:

CDH20

Ensembl Gene ID:

ENSAPLG00000011358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011974

75005067 - 75041026

35960