Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_75231349_75292234_R

Intron Information:

Intron Rank:

148855

Intron Class:

major

Intron Phase:

Intron Coordinates:

75231349 - 75292234

Intron Length:

60886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

GCATTTTGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TGCTAATTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

30.2

Major BPS

73.8

0.59

0.9

26.8

Major PPT

73.8

0.53

68.7

41.8

Minor 5ss

45.5

-0.5

2.9

64.1

47.4

Minor BPS

52.7

0.16

1.9

72.72

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028919

75227584 - 75308319

80736