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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_75388909_75412495_R

Intron Information:

Intron Rank:
132855
Intron Class:
major
Intron Phase:
Intron Coordinates:
75388909 - 75412495
Intron Length:
23587

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TTG|GTAAGAACC
5'SS Class:
strong_major
3'SS Sequence:
TCATTTTATGCAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
ATTTTAT
U12 Branch Point Sequence:
AAGTCTATCATT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
83.8
0.8
0.9
74.3
34.1
Major BPS
87.7
0.94
0.8
77.7
36.7
Major PPT
81.1
0.7
0.9
77.2
35.8
Minor 5ss
34.9
-1.7
2.9
42.4
38.2
Minor BPS
46.7
-0.1
1.9
64.06
40.8

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000018691
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000032454
75386230 - 75423845
37616