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Intron Name: Anas_platyrhynchos_platyrhynchos_2_75539152_75563558_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75539152 - 75563558

Intron Length:

24407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCATTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

AACATTTTAAAT

Flanking Amino Acid:

MPKPTLVTIARWRTNKEFGL

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

72.8

39.3

Major BPS

100

1.24

0.5

100

Major PPT

86.3

0.82

0.7

81.2

30.4

Minor 5ss

40.1

-1.1

3.2

57.3

46.8

Minor BPS

54.4

0.22

1.4

65.05

39.3

Associated Gene:

Gene:

C5orf22

Ensembl Gene ID:

ENSAPLG00000004273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037084

75538097 - 75575669

37573