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Intron Name: Anas_platyrhynchos_platyrhynchos_2_75568490_75570505_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75568490 - 75570505

Intron Length:

2016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTTGAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TCTTTTTTGAAG

Flanking Amino Acid:

KNPFKEMYTQTEYEILQELY

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

81.8

38.5

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

83.4

0.75

0.9

86.2

25.3

Minor 5ss

-0.8

2.9

56.9

47.4

Minor BPS

58.2

0.11

1.5

62.4

40.1

Associated Gene:

Gene:

C5orf22

Ensembl Gene ID:

ENSAPLG00000004273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037084

75538097 - 75575669

37573

ENSAPLT00000004391

75561737 - 75575669

13933