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Intron Name: Anas_platyrhynchos_platyrhynchos_2_75718793_75723913_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

75718793 - 75723913

Intron Length:

5121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

AAGTACTTAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

71.9

32.2

Major BPS

84.7

0.86

74.3

40.7

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

38.6

-1.3

3.1

51.6

45.1

Minor BPS

59.8

0.3

1.6

65.84

39.7

Associated Gene:

Gene:

CDH6

Ensembl Gene ID:

ENSAPLG00000005708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022926

75669204 - 75724036

54833

ENSAPLT00000005960

75671287 - 75770008

98722