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Intron Name: Anas_platyrhynchos_platyrhynchos_2_75724037_75769847_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

75724037 - 75769847

Intron Length:

45811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

GTCTTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

ACAGCCTTAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

68.2

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

76.5

0.6

0.9

69.6

36.8

Minor 5ss

33.1

-1.9

3.2

43.9

43.7

Minor BPS

65.6

0.47

1.4

65.29

40.7

Associated Gene:

Gene:

CDH6

Ensembl Gene ID:

ENSAPLG00000005708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005960

75671287 - 75770008

98722