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Intron Name: Anas_platyrhynchos_platyrhynchos_2_76669416_76670340_R


Intron Information:

Intron Rank:
153596

Intron Class:
minor-like

Intron Phase:

Intron Coordinates:
76669416 - 76670340

Intron Length:
925

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTT|GTATCCTTT

5'SS Class:
strong_minor

3'SS Sequence:
AACCACCATCAAG|A

3'SS Class:
degenerate_minor

U2 Branch Point Sequence:
TCCTTAC

U12 Branch Point Sequence:
CGTTCCTTACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
50.9
0.02
1.2
57.1
42.4

Major BPS
68.9
0.47
1
59.6
38.6

Major PPT
49.1
-0
1.1
42.7
36.8

Minor 5ss
98.8
1.64
0.5
96
12.5

Minor BPS
56.1
0.05
1.9
61.3
46.1

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

76669219 - 76676506
7288

76669219 - 76676394
7176