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Intron Name: Anas_platyrhynchos_platyrhynchos_2_772261_778083_R

Intron Information:

Intron Rank:

138280

Intron Class:

major

Intron Phase:

Intron Coordinates:

772261 - 778083

Intron Length:

5823

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCGTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

CTTTCTCCACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.2

40.6

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

81.5

0.71

0.8

33.4

Minor 5ss

36.8

-1.5

3.5

53.4

44.8

Minor BPS

47.4

-0.1

2.1

72.5

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031634

771898 - 799818

27921

ENSAPLT00000020837

771373 - 799818

28446