Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_77529495_77541135_R

Intron Information:

Intron Rank:

137674

Intron Class:

major

Intron Phase:

Intron Coordinates:

77529495 - 77541135

Intron Length:

11641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTTAC

5'SS Class:

major

3'SS Sequence:

TGGTCTTTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTATTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.1

71.4

35.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

60.7

0.24

1.2

42.3

Minor 5ss

42.5

-0.8

2.8

53.4

43.8

Minor BPS

56.7

0.29

1.8

77.56

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029769

77528764 - 77546916

18153

ENSAPLT00000023758

77528764 - 77546916

18153