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Intron Name: Anas_platyrhynchos_platyrhynchos_2_77566723_77566827_R

Intron Information:

Intron Rank:

133452

Intron Class:

major

Intron Phase:

Intron Coordinates:

77566723 - 77566827

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CATTTTTCAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

90.7

0.92

0.6

84.9

29.9

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

48.8

-0.2

1.7

53.4

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019061

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024001

77552481 - 77572038

19558