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Intron Name: Anas_platyrhynchos_platyrhynchos_2_77799619_77800928_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

77799619 - 77800928

Intron Length:

1310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTATTTT

5'SS Class:

major

3'SS Sequence:

ATTTGCTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTTTCTTTATTA

Flanking Amino Acid:

TQEGIITVKKQLDFENKMLY

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.2

35.3

Major BPS

84.7

0.86

74.3

40.7

Major PPT

75.5

0.57

0.9

66.5

40.1

Minor 5ss

47.9

-0.2

2.6

67.6

43.4

Minor BPS

73.6

0.74

1.5

82.84

32.3

Associated Gene:

Gene:

CDH9

Ensembl Gene ID:

ENSAPLG00000005927

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006173

77747384 - 77820358

72975