Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_77865544_77881626_R

Intron Information:

Intron Rank:

147230

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

77865544 - 77881626

Intron Length:

16083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAGTA

5'SS Class:

strong_major

3'SS Sequence:

GCATTGAAAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

AAATTTTTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.6

30.5

Major BPS

87.3

0.93

0.8

36.5

Major PPT

50.2

0.01

1.1

44.7

40.3

Minor 5ss

33.4

-1.9

3.6

46.9

48.4

Minor BPS

70.4

0.62

1.1

70.46

34.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026529

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047243

77865365 - 77881977

16613