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Intron Name: Anas_platyrhynchos_platyrhynchos_2_78399986_78404971_F

Intron Information:

Intron Rank:

146559

Intron Class:

major

Intron Phase:

Intron Coordinates:

78399986 - 78404971

Intron Length:

4986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTATGCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGCATTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

77.7

31.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.4

0.64

0.9

72.8

37.3

Minor 5ss

48.6

-0.1

2.8

67.6

43.7

Minor BPS

63.4

0.5

1.3

72.43

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044122

78399954 - 78406072

6119

ENSAPLT00000029476

78399954 - 78410206

10253