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Intron Name: Anas_platyrhynchos_platyrhynchos_2_78405077_78405895_F

Intron Information:

Intron Rank:

146563

Intron Class:

major

Intron Phase:

Intron Coordinates:

78405077 - 78405895

Intron Length:

819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATCTTTACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.5

40.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

69.3

0.43

67.8

32.6

Minor 5ss

32.9

-2

2.9

40.4

45.3

Minor BPS

0.64

1.6

78.94

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044122

78399954 - 78406072

6119