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Intron Name: Anas_platyrhynchos_platyrhynchos_2_7847030_7851547_F


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7847030 - 7851547

Intron Length:
4518

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGA|GTAAGAATG

5'SS Class:
major

3'SS Sequence:
CTTCTTCTTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTGTGAT

U12 Branch Point Sequence:
TTTTTGTGATCT

Flanking Amino Acid:
VTVHNTTDTQKIFELEVNEN

Intron Amino Acid Position:
508

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.7
0.54
1.1
69.2
41.7

Major BPS
81.2
0.78
1.1
71.4
45.1

Major PPT
90
0.9
0.6
88.2
21.5

Minor 5ss
38.4
-1.3
3
46.2
42.8

Minor BPS
49.5
0.04
2.3
80.23
41.8

Associated Gene:

Gene:
DPP6

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7549629 - 7862491
312863

7613822 - 7862491
248670

7654974 - 7862491
207518