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Intron Name: Anas_platyrhynchos_platyrhynchos_2_78560013_78562096_F

Intron Information:

Intron Rank:

142320

Intron Class:

major

Intron Phase:

Intron Coordinates:

78560013 - 78562096

Intron Length:

2084

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

GGTTATCCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

TTACCACTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

33.4

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

66.5

0.37

0.9

63.1

39.3

Minor 5ss

46.5

-0.4

2.8

65.7

45.4

Minor BPS

53.6

0.19

1.9

76.93

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026633

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024684

78555338 - 78562385

7048