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Intron Name: Anas_platyrhynchos_platyrhynchos_2_7857022_7857781_F


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7857022 - 7857781

Intron Length:
760

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACATTT

5'SS Class:
strong_major

3'SS Sequence:
GTTTGTGTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAT

U12 Branch Point Sequence:
GACTGCTGATGT

Flanking Amino Acid:
DKMRVGVFGKDYGGYLSTYM

Intron Amino Acid Position:
648

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.7
0.72
1.1
81.6
33.2

Major BPS
76.2
0.65
1.1
65.3
43.7

Major PPT
78.5
0.64
1
69.2
46.1

Minor 5ss
49.4
-0
2.9
73.9
42.6

Minor BPS
40.4
-0.6
2.2
54.51
46.7

Associated Gene:

Gene:
DPP6

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7654974 - 7862491
207518

7549629 - 7862491
312863

7613822 - 7862491
248670