Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_7860050_7860148_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7860050 - 7860148

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GCCTCTTTAATG

Flanking Amino Acid:

TFLIIHATADEKIHFQHTAD

Intron Amino Acid Position:

727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.7

34.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

88.5

0.87

0.7

83.2

31.9

Minor 5ss

39.7

-1.2

2.8

46.1

43.6

Minor BPS

64.7

0.32

1.4

59.22

43.5

Associated Gene:

Gene:

DPP6

Ensembl Gene ID:

ENSAPLG00000008020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022795

7613822 - 7862491

248670

ENSAPLT00000020204

7654974 - 7862491

207518

ENSAPLT00000008356

7549629 - 7862491

312863