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Intron Name: Anas_platyrhynchos_platyrhynchos_2_78838562_78843651_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78838562 - 78843651

Intron Length:

5090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGCTGC

5'SS Class:

major

3'SS Sequence:

ATTTCTTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TGGTTCTTAATT

Flanking Amino Acid:

VNDNPPRFPQSTIHLRIPES

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

57.8

42.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

79.8

0.67

76.5

Minor 5ss

45.5

-0.5

2.8

55.5

43.2

Minor BPS

77.5

0.94

1.1

84.09

37.1

Associated Gene:

Gene:

CDH10

Ensembl Gene ID:

ENSAPLG00000007403

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007760

78808649 - 78867918

59270