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Intron Name: Anas_platyrhynchos_platyrhynchos_2_78865439_78867350_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

78865439 - 78867350

Intron Length:

1912

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAAGAAG

5'SS Class:

major

3'SS Sequence:

AATGTTGCTGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

AGCTGGTGAAAT

Flanking Amino Acid:

MQIPQSNQGMHKSVVSDGSA

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.2

0.26

1.1

41.9

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

58.7

0.2

1.2

57.3

42.7

Minor 5ss

33.2

-1.9

3.3

44.6

44.3

Minor BPS

40.3

-0.6

2.4

57.22

44.9

Associated Gene:

Gene:

CDH10

Ensembl Gene ID:

ENSAPLG00000007403

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007760

78808649 - 78867918

59270