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Intron Name: Anas_platyrhynchos_platyrhynchos_2_7894251_7894333_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7894251 - 7894333

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTACGTACA

5'SS Class:

major

3'SS Sequence:

TTCTTTCATTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTTCTTTCATT

Flanking Amino Acid:

RKLMEHKQNKSLPEIILISC

Intron Amino Acid Position:

1024

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

74.6

35.6

Major BPS

87.6

0.93

0.9

89.3

Major PPT

81.9

0.72

0.8

28.9

Minor 5ss

36.7

-1.5

2.9

43.3

37.8

Minor BPS

67.1

0.62

1.7

82.98

39.3

Associated Gene:

Gene:

PAXIP1

Ensembl Gene ID:

ENSAPLG00000007829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041814

7893518 - 7927689

34172

ENSAPLT00000008155

7893127 - 7927689

34563