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Intron Name: Anas_platyrhynchos_platyrhynchos_2_7894469_7895680_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7894469 - 7895680

Intron Length:

1212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACACAGT

5'SS Class:

major

3'SS Sequence:

TTTCTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GCTTTCTTATTC

Flanking Amino Acid:

KRAQVAPLFKGKFFYITPGI

Intron Amino Acid Position:

979

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

1.1

66.2

45.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

89.5

0.89

0.6

20.1

Minor 5ss

39.4

-1.2

3.3

46.3

Minor BPS

60.5

0.31

1.6

66.16

40.1

Associated Gene:

Gene:

PAXIP1

Ensembl Gene ID:

ENSAPLG00000007829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008155

7893127 - 7927689

34563

ENSAPLT00000041814

7893518 - 7927689

34172