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Intron Name: Anas_platyrhynchos_platyrhynchos_2_7897643_7900085_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7897643 - 7900085

Intron Length:

2443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACTTTT

5'SS Class:

strong_major

3'SS Sequence:

GCATAACTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTGCATAACT

Flanking Amino Acid:

EPMQVQQYIKKLYILGGEVA

Intron Amino Acid Position:

889

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

1.1

83.9

30.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

68.4

0.42

62.8

42.8

Minor 5ss

46.2

-0.4

2.8

66.9

44.4

Minor BPS

69.4

0.69

93.11

35.2

Associated Gene:

Gene:

PAXIP1

Ensembl Gene ID:

ENSAPLG00000007829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041814

7893518 - 7927689

34172

ENSAPLT00000008155

7893127 - 7927689

34563