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Intron Name: Anas_platyrhynchos_platyrhynchos_2_7900189_7900560_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7900189 - 7900560

Intron Length:

372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

ACATATCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTTCACATATCT

Flanking Amino Acid:

PSLQPSSKRARIEDLPPPTK

Intron Amino Acid Position:

854

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

74.7

35.3

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

69.3

0.44

0.9

62.8

38.5

Minor 5ss

34.2

-1.8

2.9

42.9

43.6

Minor BPS

51.4

0.12

2.1

80.02

41.1

Associated Gene:

Gene:

PAXIP1

Ensembl Gene ID:

ENSAPLG00000007829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041814

7893518 - 7927689

34172

ENSAPLT00000008155

7893127 - 7927689

34563