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Intron Name: Anas_platyrhynchos_platyrhynchos_2_79005204_79006972_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79005204 - 79006972

Intron Length:

1769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCTGA

5'SS Class:

major

3'SS Sequence:

CTTTATCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

CATTTTCCAACT

Flanking Amino Acid:

FEEKTYPLLPKFLELITRYY

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

62.3

40.8

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

87.5

0.84

0.7

84.9

29.5

Minor 5ss

38.3

-1.3

47.2

48.2

Minor BPS

49.1

0.01

1.9

69.52

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034371

79003191 - 79010724

7534

ENSAPLT00000001562

79003191 - 79010660

7470