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Intron Name: Anas_platyrhynchos_platyrhynchos_2_7900629_7902446_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7900629 - 7902446

Intron Length:

1818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTTGA

5'SS Class:

major

3'SS Sequence:

GCTCTAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

GATGCTCTAATT

Flanking Amino Acid:

PLKVSPELLMGVRLPLKPKQ

Intron Amino Acid Position:

832

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

69.4

37.6

Major BPS

82.2

0.8

0.9

81.6

Major PPT

74.8

0.56

0.9

70.5

38.9

Minor 5ss

45.8

-0.4

2.5

55.3

44.2

Minor BPS

53.5

0.19

1.8

70.43

40.8

Associated Gene:

Gene:

PAXIP1

Ensembl Gene ID:

ENSAPLG00000007829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041814

7893518 - 7927689

34172

ENSAPLT00000008155

7893127 - 7927689

34563