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Intron Name: Anas_platyrhynchos_platyrhynchos_2_79007789_79009211_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79007789 - 79009211

Intron Length:

1423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTCC

5'SS Class:

strong_major

3'SS Sequence:

TATTGTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTGTTTCACA

Flanking Amino Acid:

TSETPFRLSKTRTKPVQMMF

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.2

30.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.7

0.71

0.9

76.1

37.6

Minor 5ss

40.8

-1

2.8

53.7

43.5

Minor BPS

54.1

0.12

2.2

71.96

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034371

79003191 - 79010724

7534

ENSAPLT00000001562

79003191 - 79010660

7470