Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_79016213_79016455_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79016213 - 79016455

Intron Length:

243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATGTATCCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TTTTCTTTCAAT

Flanking Amino Acid:

INGWVEEKTEGKIKNLLAEG

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

90.4

20.6

Major BPS

0.72

78.4

31.2

Major PPT

62.5

0.28

1.1

39.7

Minor 5ss

33.2

-1.9

3.4

48.7

47.5

Minor BPS

68.2

0.65

1.8

88.96

35.8

Associated Gene:

Gene:

SERPINB8

Ensembl Gene ID:

ENSAPLG00000012569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013114

79013138 - 79020397

7260