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Intron Name: Anas_platyrhynchos_platyrhynchos_2_7905484_7906441_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7905484 - 7906441

Intron Length:

958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGATTC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCTTACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GTTCTCTTACCA

Flanking Amino Acid:

DKQLLATWKRIIQAHGGTVD

Intron Amino Acid Position:

637

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

75.9

34.8

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

77.3

0.61

0.9

70.4

Minor 5ss

42.1

-0.9

3.1

51.6

45.1

Minor BPS

63.4

0.42

1.6

73.25

38.4

Associated Gene:

Gene:

PAXIP1

Ensembl Gene ID:

ENSAPLG00000007829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041814

7893518 - 7927689

34172

ENSAPLT00000008155

7893127 - 7927689

34563