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Intron Name: Anas_platyrhynchos_platyrhynchos_2_7906537_7907375_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7906537 - 7907375

Intron Length:

839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTTAGTAGT

5'SS Class:

major

3'SS Sequence:

CAAACTATTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTCCTTTATG

Flanking Amino Acid:

PLFGHDPAVEIPEEYFLLGC

Intron Amino Acid Position:

605

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.2

76.7

38.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

65.9

0.36

55.1

Minor 5ss

35.5

-1.6

2.7

44.7

36.5

Minor BPS

67.4

0.4

1.7

71.23

42.1

Associated Gene:

Gene:

PAXIP1

Ensembl Gene ID:

ENSAPLG00000007829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041814

7893518 - 7927689

34172

ENSAPLT00000008155

7893127 - 7927689

34563