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Intron Name: Anas_platyrhynchos_platyrhynchos_2_7908100_7910572_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7908100 - 7910572

Intron Length:

2473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

GATTACAAAACT

Flanking Amino Acid:

QINRPSNVAHILQSLSAPTK

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

77.9

0.69

0.8

75.9

Major PPT

0.76

0.8

76.9

37.3

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

48.8

-0

2.1

72.46

43.5

Associated Gene:

Gene:

PAXIP1

Ensembl Gene ID:

ENSAPLG00000007829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041814

7893518 - 7927689

34172

ENSAPLT00000008155

7893127 - 7927689

34563