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Intron Name: Anas_platyrhynchos_platyrhynchos_2_7911218_7914001_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7911218 - 7914001

Intron Length:

2784

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTAAATTGAAT

Flanking Amino Acid:

THLIVPEPKGEKYECACKHD

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

78.9

35.3

Major BPS

100

1.24

0.5

100

Major PPT

86.6

0.82

0.7

80.5

31.5

Minor 5ss

35.9

-1.6

3.6

48.1

47.5

Minor BPS

49.3

0.03

75.92

39.9

Associated Gene:

Gene:

PAXIP1

Ensembl Gene ID:

ENSAPLG00000007829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008155

7893127 - 7927689

34563

ENSAPLT00000041814

7893518 - 7927689

34172