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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_79116210_79117362_F

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
79116210 - 79117362
Intron Length:
1153

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ATA|GTAAGTGTG
5'SS Class:
major
3'SS Sequence:
TTTCTCTCATCAG|T
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
ACTTCAT
U12 Branch Point Sequence:
TTTCTCTCATCA
Flanking Amino Acid:
SKNDIVLVMEYVEGGELFDR
Intron Amino Acid Position:
395

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
77.9
0.66
1
71.7
38.4
Major BPS
78.6
0.71
1
79.6
32.9
Major PPT
82.5
0.73
0.8
82.5
27.7
Minor 5ss
38.2
-1.3
3.3
50.9
41.1
Minor BPS
56.2
0.19
1.8
72.92
38.8

Associated Gene:

Gene:
MYLK4
Ensembl Gene ID:
ENSAPLG00000013701
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000032031
79099385 - 79123394
24010
ENSAPLT00000014267
79051775 - 79123394
71620