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Intron Name: Anas_platyrhynchos_platyrhynchos_2_7914116_7915110_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7914116 - 7915110

Intron Length:

995

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

ACTTTCCTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

ACCTATTTACTT

Flanking Amino Acid:

FFGVTACLSQVSSEDRNTLW

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

76.1

0.59

0.8

74.1

30.3

Minor 5ss

35.2

-1.7

49.5

46.3

Minor BPS

48.5

-0

1.8

62.25

42.8

Associated Gene:

Gene:

PAXIP1

Ensembl Gene ID:

ENSAPLG00000007829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041814

7893518 - 7927689

34172

ENSAPLT00000008155

7893127 - 7927689

34563