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Intron Name: Anas_platyrhynchos_platyrhynchos_2_7949972_7950862_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7949972 - 7950862

Intron Length:

891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACATAT

U12 Branch Point Sequence:

TATGGCTCAACT

Flanking Amino Acid:

ITPVTPGALEVKEAAQQPQM

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

72.3

39.5

Major BPS

54.1

0.1

50.6

Major PPT

75.8

0.58

1.1

72.9

42.2

Minor 5ss

33.1

-1.9

3.2

43.3

44.4

Minor BPS

55.1

0.24

2.1

77.44

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023307

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034679

7949228 - 7951195

1968