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Intron Name: Anas_platyrhynchos_platyrhynchos_2_79598853_79670066_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79598853 - 79670066

Intron Length:

71214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCGCAG

U12 Branch Point Sequence:

TTCTTTTCCACA

Flanking Amino Acid:

NHKYYRPTEVDFLQGDCTKA

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

43.5

-0.4

1.7

54.7

43.1

Major PPT

87.3

0.84

0.6

83.5

24.9

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

49.3

-0

1.9

66.33

40.9

Associated Gene:

Gene:

GMDS

Ensembl Gene ID:

ENSAPLG00000013864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014446

79265182 - 79671011

405830