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Intron Name: Anas_platyrhynchos_platyrhynchos_2_79728506_79730258_F

Intron Information:

Intron Rank:

149738

Intron Class:

major

Intron Phase:

Intron Coordinates:

79728506 - 79730258

Intron Length:

1753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTATTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

CAAGCTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

90.1

0.9

0.7

88.2

28.6

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

49.1

0.01

1.7

61.18

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033770

79707466 - 79740730

33265

ENSAPLT00000042949

79707466 - 79730928

23463