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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_79815021_79845824_F

Intron Information:

Intron Rank:
149272
Intron Class:
major
Intron Phase:
Intron Coordinates:
79815021 - 79845824
Intron Length:
30804

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTGAGTTAA
5'SS Class:
strong_major
3'SS Sequence:
CTTTGCCATCTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TACTGAC
U12 Branch Point Sequence:
TCTTCCCTATTT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
92.8
1.01
0.7
85.4
19.4
Major BPS
73.6
0.59
0.9
63.3
35.6
Major PPT
71.3
0.48
0.9
63.1
38.7
Minor 5ss
34.1
-1.8
2.8
39.9
46.1
Minor BPS
59.6
0.38
2
80.43
41.9

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000030267
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000041267
79814555 - 79846138
31584