Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_79962886_79964146_R

Intron Information:

Intron Rank:

149891

Intron Class:

major

Intron Phase:

Intron Coordinates:

79962886 - 79964146

Intron Length:

1261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCTTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

AGGCACTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

85.8

25.2

Major BPS

0.57

1.2

77.7

37.1

Major PPT

76.6

0.6

0.8

69.3

36.9

Minor 5ss

40.8

-1

58.4

46.2

Minor BPS

46.8

-0.1

1.7

60.76

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028204

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041306

79961511 - 79964833

3323