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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80007874_80008908_F

Intron Information:

Intron Rank:

125263

Intron Class:

major

Intron Phase:

Intron Coordinates:

80007874 - 80008908

Intron Length:

1035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTGGTTTG

5'SS Class:

major

3'SS Sequence:

TCTATTTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTTCCTCTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.2

63.5

43.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

77.2

0.61

78.7

33.4

Minor 5ss

38.9

-1.2

47.1

42.9

Minor BPS

67.4

0.63

1.8

88.55

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042775

80006701 - 80009575

2875