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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80058172_80062399_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

80058172 - 80062399

Intron Length:

4228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTCATAGTAGGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.5

1.07

0.7

84.1

30.2

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

83.7

0.76

0.8

77.2

37.1

Minor 5ss

39.6

-1.2

2.8

49.9

46.3

Minor BPS

36.9

-0.9

2.4

56.88

45.7

Associated Gene:

Gene:

EXOC2

Ensembl Gene ID:

ENSAPLG00000013910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014529

80024763 - 80174569

149807