Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_80064136_80074105_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80064136 - 80074105

Intron Length:

9970

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

ATTCATTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TCTCACTGAAGA

Flanking Amino Acid:

PANPLGIEIDKGRFPQKDLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.7

30.1

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

84.2

0.77

0.8

81.3

35.4

Minor 5ss

33.3

-1.9

2.7

38.5

32.5

Minor BPS

48.5

-0.1

1.9

62.87

42.9

Associated Gene:

Gene:

EXOC2

Ensembl Gene ID:

ENSAPLG00000013910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014529

80024763 - 80174569

149807