Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_80095397_80095496_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80095397 - 80095496

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAATTC

5'SS Class:

major

3'SS Sequence:

TGTTGTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

AAATGTTTATTG

Flanking Amino Acid:

PLNIERNIQKGDYDVVINDY

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

33.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

75.5

0.57

1.1

79.2

38.4

Minor 5ss

47.9

-0.2

2.9

67.6

43.7

Minor BPS

45.1

-0.5

1.9

47.35

40.3

Associated Gene:

Gene:

EXOC2

Ensembl Gene ID:

ENSAPLG00000013910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014529

80024763 - 80174569

149807